Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEN98359.1IS66 Orf2 like protein; COG3436 Transposase and inactivated derivatives. (98 aa)    
Predicted Functional Partners:
AEN98360.1
COG3436 Transposase and inactivated derivatives.
 
     0.864
AEN95537.1
COG3436 Transposase and inactivated derivatives.
 
     0.780
AEN98351.1
COG3436 Transposase and inactivated derivatives.
 
     0.780
AEN97536.1
COG3436 Transposase and inactivated derivatives.
 
     0.779
AEN97535.1
COG3436 Transposase and inactivated derivatives.
 
     0.777
AEN98358.1
Hypothetical protein.
       0.625
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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