Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN98418.1Hypothetical protein. (332 aa)    
Predicted Functional Partners:
AEN98415.1
Hypothetical protein; COG0358 DNA primase (bacterial type).
 
     0.855
AEN98409.1
Hypothetical protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
 
     0.818
AEN98412.1
Hypothetical protein; COG3843 Type IV secretory pathway, VirD2 components (relaxase).
 
     0.795
AEN98405.1
Hypothetical protein.
 
     0.777
AEN98421.1
Hypothetical protein.
 
     0.770
AEN98403.1
Hypothetical protein; COG0148 Enolase.
 
     0.767
AEN98399.1
Hypothetical protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
  
     0.723
AEN98155.1
Hypothetical protein; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair.
  
     0.717
AEN97591.1
Hypothetical protein.
  
     0.709
AEN98259.1
Hypothetical protein.
  
     0.701
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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