STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN98426.1ATPase, P-type (transporting), HAD superfamily, subfamily IC; COG0474 Cation transport ATPase. (781 aa)    
Predicted Functional Partners:
AEN95162.1
COG1285 Uncharacterized membrane protein.
  
 
 0.508
AEN98425.1
COG3973 Superfamily I DNA and RNA helicases.
       0.504
AEN98423.1
Hypothetical protein; COG1454 Alcohol dehydrogenase, class IV.
  
   0.499
AEN97955.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
   0.427
AEN97644.1
Sodium/hydrogen exchanger; COG0475 Kef-type K+ transport systems, membrane components.
 
 
 0.424
AEN95152.1
COG3209 Rhs family protein.
   
  
 0.414
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.