Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN98436.1COG0700 Uncharacterized membrane protein. (174 aa)    
Predicted Functional Partners:
AEN98438.1
Nucleoside recognition domain protein; COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis.
  
 0.998
AEN96590.1
Nucleoside recognition domain-containing protein; COG3314 Uncharacterized protein conserved in bacteria.
 
  
 0.849
AEN96932.1
Stage III sporulation protein AA; COG3854 Uncharacterized protein conserved in bacteria.
  
  
 0.681
AEN96929.1
Stage III sporulation protein AD.
  
   
 0.649
AEN96446.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.629
AEN98437.1
COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
       0.595
AEN96931.1
Hypothetical protein.
   
  
 0.557
AEN96249.1
Stage II sporulation protein P.
  
  
 0.548
AEN96666.1
Sporulation protein YqfD.
  
  
 0.540
AEN96925.1
Hypothetical protein.
  
  
 0.535
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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