Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN98446.1COG1728 Uncharacterized protein conserved in bacteria. (146 aa)    
Predicted Functional Partners:
AEN98444.1
Hypothetical protein; COG1774 Uncharacterized homolog of PSP1.
  
  
 0.853
AEN98445.1
COG2812 DNA polymerase III, gamma/tau subunits.
 
     0.835
AEN98443.1
Hypothetical protein; COG4123 Predicted O-methyltransferase.
  
    0.817
AEN95249.1
COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor).
 
 
   0.806
AEN98269.1
Hypothetical protein.
 
 
 0.796
AEN95250.1
Hypothetical protein.
 
     0.795
AEN95253.1
Flagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
   0.791
AEN97592.1
Hypothetical protein.
 
     0.791
AEN98447.1
COG0194 Guanylate kinase.
       0.789
fliE
Hypothetical protein; COG1677 Flagellar hook-basal body protein.
 
   0.784
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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