Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN98467.1Hypothetical protein; COG0582 Integrase. (68 aa)    
Predicted Functional Partners:
AEN96413.1
Hypothetical protein.
  
     0.488
AEN98196.1
Hypothetical protein.
  
     0.480
AEN98468.1
COG0546 Predicted phosphatases.
 
     0.470
AEN97803.1
Permease; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
     0.467
AEN98466.1
Filamentation induced by cAMP protein Fic.
       0.465
AEN98471.1
COG0307 Riboflavin synthase alpha chain.
 
     0.410
AEN96696.1
COG0287 Prephenate dehydrogenase.
  
    0.406
AEN97593.1
COG1040 Predicted amidophosphoribosyltransferases.
   
    0.401
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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