STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN98481.1COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (318 aa)    
Predicted Functional Partners:
AEN96145.1
Hypothetical protein; COG1925 Phosphotransferase system, HPr-related proteins.
  
     0.594
AEN96764.1
Hypothetical protein; COG0459 Chaperonin GroEL (HSP60 family).
  
     0.578
AEN96490.1
COG3906 Uncharacterized protein conserved in bacteria.
  
     0.570
AEN98479.1
Two-component response regulator (extracellular proteinase response regulator); COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
     
 0.511
AEN98480.1
Histidine kinase; COG4585 Signal transduction histidine kinase.
       0.506
AEN97749.1
Hypothetical protein.
  
   
 0.497
AEN97659.1
Hypothetical protein.
  
     0.485
AEN96964.1
Hypothetical protein.
  
     0.463
AEN96692.1
Hypothetical protein.
  
     0.462
AEN96215.1
Hypothetical protein.
  
     0.459
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.