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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII49488.1Aspartate aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (392 aa)    
Predicted Functional Partners:
pheA
Chorismate mutase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.982
argG
Argininosuccinate synthase; Catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.917
argJ
Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
     
 0.916
AII48284.1
Histidinol-phosphate aminotransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
0.916
pyrB
Aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
  
  0.915
AII48751.1
Cystathionine gamma-synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.915
AII47672.1
Arogenate dehydrogenase; Catalyzes the formation of tyrosine from arogenate; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.910
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
   
 0.910
AII48090.1
Asparagine synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.908
AII48285.1
Asparaginase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.908
Your Current Organism:
Synechococcus sp. KORDI52
NCBI taxonomy Id: 585425
Other names: S. sp. KORDI-52, Synechococcus sp. KORDI-52
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