Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LSM1 | LSM4 | A5K4Q4 | A5K493 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
| LSM1 | PVX_003660 | A5K4Q4 | A5KBJ4 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 5'-3' exoribonuclease, putative. | 0.991 |
| LSM1 | PVX_080215 | A5K4Q4 | A5K9F2 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | BIS(5'-nucleosyl)-tetraphosphatase, putative. | 0.847 |
| LSM1 | PVX_088190 | A5K4Q4 | A5KAD4 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Helicase, putative. | 0.961 |
| LSM1 | PVX_095195 | A5K4Q4 | A5K7L9 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family. | 0.961 |
| LSM1 | PVX_111120 | A5K4Q4 | A5KDX6 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Asparagine-rich antigen, putative. | 0.902 |
| LSM1 | PVX_117475 | A5K4Q4 | A5K3F9 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | 0.882 |
| LSM1 | PVX_118625 | A5K4Q4 | A5K436 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.708 |
| LSM1 | PVX_122275 | A5K4Q4 | A5JZ80 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Nudix hydrolase domain-containing protein. | 0.961 |
| LSM4 | LSM1 | A5K493 | A5K4Q4 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 0.999 |
| LSM4 | PVX_003660 | A5K493 | A5KBJ4 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 5'-3' exoribonuclease, putative. | 0.907 |
| LSM4 | PVX_080215 | A5K493 | A5K9F2 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | BIS(5'-nucleosyl)-tetraphosphatase, putative. | 0.838 |
| LSM4 | PVX_080540 | A5K493 | A5K9L7 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Tubulin tyrosine ligase-like protein 1, putative. | 0.411 |
| LSM4 | PVX_088190 | A5K493 | A5KAD4 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Helicase, putative. | 0.896 |
| LSM4 | PVX_095195 | A5K493 | A5K7L9 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family. | 0.896 |
| LSM4 | PVX_111120 | A5K493 | A5KDX6 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Asparagine-rich antigen, putative. | 0.922 |
| LSM4 | PVX_117475 | A5K493 | A5K3F9 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | 0.909 |
| LSM4 | PVX_118625 | A5K493 | A5K436 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.542 |
| LSM4 | PVX_122275 | A5K493 | A5JZ80 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Nudix hydrolase domain-containing protein. | 0.947 |
| PVX_003660 | LSM1 | A5KBJ4 | A5K4Q4 | 5'-3' exoribonuclease, putative. | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 0.991 |
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