STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gloBMetallo-beta-lactamase domain protein; COG: COG0491. (210 aa)    
Predicted Functional Partners:
EEJ52660.1
Hypothetical protein.
       0.773
nox
Pyridine nucleotide-disulfide oxidoreductase; COG: COG0446.
   
 0.742
EEJ50320.1
Pyridine nucleotide-disulfide oxidoreductase; COG: COG0446.
   
 0.742
EEJ51425.1
Glyoxalase family protein; COG: COG0346.
    
 0.688
EEJ50547.1
Hypothetical protein.
    
 0.688
EEJ50513.1
Hypothetical protein.
    
 0.688
EEJ51778.1
PP-loop family protein; COG: COG0037; Belongs to the TtcA family.
  
 0.677
relA
RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
 
  0.667
EEJ52230.1
Rhodanese-like protein.
  
 0.634
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
 
 0.557
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.