STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ52625.1ABC transporter, ATP-binding protein; COG: COG1131. (279 aa)    
Predicted Functional Partners:
EEJ52624.1
ABC-2 type transporter.
  
 
  0.857
EEJ52348.1
Hypothetical protein.
  
 0.840
EEJ51928.1
ABC transporter, ATP-binding protein.
  
  
  0.760
EEJ50529.1
ABC-2 type transporter.
  
 
 0.735
ecfA
Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 
0.653
EEJ52622.1
Cobalt transport protein; COG: COG0619.
    
  0.612
EEJ50510.1
ABC-2 type transporter.
 
 
 0.583
fbpC2
ABC transporter, ATP-binding protein; COG: COG3842; Belongs to the ABC transporter superfamily.
 
  
 
0.517
EEJ52626.1
Cell wall-binding repeat protein; COG: COG5263.
       0.487
EEJ50546.1
Hypothetical protein.
 
 
 0.481
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.