STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ52593.1ABC transporter, ATP-binding protein; COG: COG4608; Belongs to the ABC transporter superfamily. (345 aa)    
Predicted Functional Partners:
EEJ52595.1
ABC transporter, permease protein; COG: COG1173.
 
 0.997
EEJ52017.1
ABC transporter, permease protein; COG: COG1173.
 
 0.997
EEJ51047.1
ABC transporter, permease protein; COG: COG1173.
 
 0.997
EEJ52596.1
ABC transporter, permease protein; COG: COG0601.
 
 0.990
EEJ52018.1
ABC transporter, permease protein; COG: COG0601.
 
 0.982
EEJ51048.1
ABC transporter, permease protein; COG: COG0601.
 
 0.975
EEJ52594.1
ABC transporter, ATP-binding protein; COG: COG0444; Belongs to the ABC transporter superfamily.
 
  
 
0.953
EEJ52014.1
ABC transporter, substrate-binding protein, family 5; COG: COG4166.
 
 0.943
EEJ52015.1
ABC transporter, ATP-binding protein; COG: COG4608; Belongs to the ABC transporter superfamily.
 
 
 
0.941
EEJ52013.1
ABC transporter, substrate-binding protein, family 5; COG: COG4166.
 
 0.940
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.