STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ52539.1GHMP kinase, N-terminal domain protein; COG: COG2605. (332 aa)    
Predicted Functional Partners:
EEJ51461.1
Nucleotidyl transferase; COG: COG1208.
 
 0.997
EEJ51456.1
Phosphoheptose isomerase family protein; COG: COG0279.
 
 0.994
gmhB
D,D-heptose 1,7-bisphosphate phosphatase; COG: COG0241.
 
 0.982
EEJ50837.1
Hypothetical protein; COG: COG1898.
  
 
 0.864
EEJ50799.1
NAD dependent epimerase/dehydratase family protein; COG: COG0451.
  
 
 0.864
rfbF
Glucose-1-phosphate cytidylyltransferase; COG: COG1208.
  
 
 0.567
czcD
Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
       0.496
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
    0.466
EEJ52618.1
NAD dependent epimerase/dehydratase family protein.
  
 
 0.450
rfbG
CDP-glucose 4,6-dehydratase; COG: COG0451.
  
 
 0.446
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.