STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ52457.1Glycosyltransferase, group 2 family protein; COG: COG0463. (319 aa)    
Predicted Functional Partners:
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
 
 0.572
EEJ50288.1
Bacterial membrane protein YfhO.
 
  
 0.531
EEJ52458.1
LICD family protein; COG: COG3475.
       0.507
EEJ51461.1
Nucleotidyl transferase; COG: COG1208.
  
 0.507
EEJ51462.1
Glycosyltransferase, group 2 family protein.
  
 
 0.478
rfbG
CDP-glucose 4,6-dehydratase; COG: COG0451.
  
 
  0.474
EEJ51613.1
Undecaprenyl-phosphate glucose phosphotransferase; COG: COG2148.
  
  
 0.426
rfbF
Glucose-1-phosphate cytidylyltransferase; COG: COG1208.
  
  0.423
EEJ50837.1
Hypothetical protein; COG: COG1898.
  
 
 0.422
EEJ50799.1
NAD dependent epimerase/dehydratase family protein; COG: COG0451.
  
 
 0.422
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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