STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ52403.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
EEJ52418.1
Ankyrin repeat protein.
      0.940
EEJ52179.1
Hypothetical protein.
    
 0.932
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 0.861
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
 0.850
EEJ52420.1
WD domain, G-beta repeat protein.
    
 0.800
EEJ50769.1
Hypothetical protein.
    
 0.800
metG
methionine--tRNA ligase, beta subunit; COG: COG0143; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.791
EEJ52540.1
Putative methionine--tRNA ligase; COG: COG0143.
   
 0.791
EEJ52004.1
Pyridine nucleotide-disulfide oxidoreductase; COG: COG0493.
   
 
 0.791
EEJ52525.1
Hypothetical protein.
    
 0.788
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.