STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ52383.1YhcH/YjgK/YiaL family protein; COG: COG2731. (150 aa)    
Predicted Functional Partners:
EEJ52382.1
Hypothetical protein; COG: COG2200.
       0.732
EEJ50727.1
Glycosyl hydrolase family 2, sugar binding domain protein; Belongs to the glycosyl hydrolase 2 family.
   
 0.732
lacZ
Beta galactosidase small chain; COG: COG3250.
   
 0.732
EEJ51114.1
ROK family protein; COG: COG1940.
 
 
  0.554
EEJ51116.1
Putative N-acetylneuraminate lyase; COG: COG0329.
 
  
 0.551
nanE
Putative N-acetylmannosamine-6-phosphate epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
  
 0.500
pmi
Putative mannose-6-phosphate isomerase, class I; COG: COG1482.
  
 
  0.482
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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