STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ52340.1Choline/ethanolamine kinase; COG: COG4750. (626 aa)    
Predicted Functional Partners:
EEJ52458.1
LICD family protein; COG: COG3475.
 
   
 0.852
EEJ50277.1
Cell wall-binding repeat protein.
 
     0.837
EEJ52346.1
Hypothetical protein.
 
  
  0.816
EEJ52352.1
Polysaccharide biosynthesis protein.
 
     0.802
EEJ51927.1
Cell wall-binding repeat protein.
 
     0.770
EEJ50429.1
Cell wall-binding repeat protein.
 
     0.768
EEJ52179.1
Hypothetical protein.
    
 0.767
EEJ52626.1
Cell wall-binding repeat protein; COG: COG5263.
 
     0.766
EEJ52516.1
Cell wall-binding repeat protein.
 
     0.766
EEJ50964.1
Hypothetical protein.
 
     0.765
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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