STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ52277.1ABC transporter, ATP-binding protein; COG: COG1121. (235 aa)    
Predicted Functional Partners:
EEJ52278.1
ABC 3 transport family protein; COG: COG1108.
 0.999
EEJ52276.1
ABC transporter, substrate-binding protein; COG: COG0803; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.998
EEJ51452.1
ABC 3 transport family protein; COG: COG1108.
 
 0.963
EEJ52275.1
Hypothetical protein; Belongs to the Fur family.
 
  
 0.946
znuB
ABC 3 transport family protein; COG: COG1108.
 
 0.913
EEJ51454.1
ABC transporter, substrate-binding protein; COG: COG0803; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.890
EEJ52279.1
Hypothetical protein.
       0.761
EEJ50561.1
Hypothetical protein.
  
     0.516
sodA1
Superoxide dismutase, Mn/Fe family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
     
 0.508
EEJ52622.1
Cobalt transport protein; COG: COG0619.
 
    
 0.477
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.