STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ52249.1Hypothetical protein. (700 aa)    
Predicted Functional Partners:
EEJ52250.1
Efflux ABC transporter, permease protein; COG: COG0577.
    0.961
EEJ52248.1
ABC transporter, ATP-binding protein; COG: COG1136.
 
     0.857
EEJ52346.1
Hypothetical protein.
  
     0.772
EEJ50277.1
Cell wall-binding repeat protein.
  
     0.765
EEJ52617.1
C-methyltransferase.
  
     0.761
EEJ51939.1
CAAX amino terminal protease family protein.
  
     0.745
EEJ51159.1
Putative peptidoglycan binding domain protein; COG: COG3409.
 
     0.743
EEJ50964.1
Hypothetical protein.
  
     0.737
EEJ52360.1
ErfK/YbiS/YcfS/YnhG.
  
     0.734
EEJ52516.1
Cell wall-binding repeat protein.
  
     0.730
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.