STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ52192.1Transglycosylase; COG: COG5009. (886 aa)    
Predicted Functional Partners:
spoVD
Penicillin-binding protein, transpeptidase domain protein; COG: COG0768.
 
 
 0.869
EEJ51977.1
Penicillin-binding protein, transpeptidase domain protein; COG: COG0768.
 
 
 0.824
EEJ52090.1
Penicillin-binding protein dimerization domain protein; COG: COG0768.
 
 
 0.765
EEJ52193.1
Putative YigZ family protein; COG: COG1739.
       0.735
EEJ52078.1
Hypothetical protein.
 
 
 0.689
EEJ50233.1
Hypothetical protein.
  
 
 0.685
mreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
 
 
 0.653
EEJ51978.1
Cell cycle protein, FtsW/RodA/SpoVE family; COG: COG0772; Belongs to the SEDS family.
  
 
 
 0.650
EEJ52079.1
Cell cycle protein, FtsW/RodA/SpoVE family; COG: COG0772; Belongs to the SEDS family.
  
 
 
 0.648
mreD
Rod shape-determining protein MreD.
  
   
 0.639
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.