Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEJ50491.1 | EEJ52200.1 | HMPREF6123_2237 | HMPREF6123_0545 | Hypothetical protein. | Hypothetical protein. | 0.830 |
EEJ50491.1 | EEJ52201.1 | HMPREF6123_2237 | HMPREF6123_0546 | Hypothetical protein. | Hypothetical protein. | 0.587 |
EEJ50967.1 | EEJ52200.1 | HMPREF6123_1756 | HMPREF6123_0545 | Hypothetical protein. | Hypothetical protein. | 0.405 |
EEJ52198.1 | EEJ52200.1 | HMPREF6123_0543 | HMPREF6123_0545 | Hypothetical protein. | Hypothetical protein. | 0.429 |
EEJ52198.1 | EEJ52201.1 | HMPREF6123_0543 | HMPREF6123_0546 | Hypothetical protein. | Hypothetical protein. | 0.429 |
EEJ52198.1 | purA | HMPREF6123_0543 | HMPREF6123_0544 | Hypothetical protein. | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.542 |
EEJ52200.1 | EEJ50491.1 | HMPREF6123_0545 | HMPREF6123_2237 | Hypothetical protein. | Hypothetical protein. | 0.830 |
EEJ52200.1 | EEJ50967.1 | HMPREF6123_0545 | HMPREF6123_1756 | Hypothetical protein. | Hypothetical protein. | 0.405 |
EEJ52200.1 | EEJ52198.1 | HMPREF6123_0545 | HMPREF6123_0543 | Hypothetical protein. | Hypothetical protein. | 0.429 |
EEJ52200.1 | EEJ52201.1 | HMPREF6123_0545 | HMPREF6123_0546 | Hypothetical protein. | Hypothetical protein. | 0.972 |
EEJ52200.1 | EEJ52306.1 | HMPREF6123_0545 | HMPREF6123_0412 | Hypothetical protein. | Hypothetical protein; COG: COG4260. | 0.862 |
EEJ52200.1 | EEJ52542.1 | HMPREF6123_0545 | HMPREF6123_0181 | Hypothetical protein. | Hypothetical protein. | 0.413 |
EEJ52200.1 | efp | HMPREF6123_0545 | HMPREF6123_0547 | Hypothetical protein. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.455 |
EEJ52200.1 | purA | HMPREF6123_0545 | HMPREF6123_0544 | Hypothetical protein. | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.596 |
EEJ52201.1 | EEJ50491.1 | HMPREF6123_0546 | HMPREF6123_2237 | Hypothetical protein. | Hypothetical protein. | 0.587 |
EEJ52201.1 | EEJ52198.1 | HMPREF6123_0546 | HMPREF6123_0543 | Hypothetical protein. | Hypothetical protein. | 0.429 |
EEJ52201.1 | EEJ52200.1 | HMPREF6123_0546 | HMPREF6123_0545 | Hypothetical protein. | Hypothetical protein. | 0.972 |
EEJ52201.1 | EEJ52306.1 | HMPREF6123_0546 | HMPREF6123_0412 | Hypothetical protein. | Hypothetical protein; COG: COG4260. | 0.587 |
EEJ52201.1 | EEJ52542.1 | HMPREF6123_0546 | HMPREF6123_0181 | Hypothetical protein. | Hypothetical protein. | 0.447 |
EEJ52201.1 | efp | HMPREF6123_0546 | HMPREF6123_0547 | Hypothetical protein. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.455 |
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