STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ52148.1ABC transporter, permease protein. (560 aa)    
Predicted Functional Partners:
EEJ52147.1
ABC transporter, solute-binding protein; COG: COG1840.
 
 
 0.994
EEJ52149.1
ABC transporter, ATP-binding protein; COG: COG3842.
 
 0.984
EEJ50955.1
ABC transporter, solute-binding protein; COG: COG1840.
 
 
 0.976
fbpC2
ABC transporter, ATP-binding protein; COG: COG3842; Belongs to the ABC transporter superfamily.
 
 0.934
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.850
EEJ52150.1
Cysteine desulfurase family protein; COG: COG0520.
       0.773
EEJ52236.1
ABC transporter, ATP-binding protein; COG: COG3842.
 
 0.760
ugpC
ABC transporter, ATP-binding protein; COG: COG3839; Belongs to the ABC transporter superfamily.
   
 0.749
yedF
Selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.
       0.509
EEJ52152.1
Hypothetical protein.
       0.509
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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