STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galEUDP-glucose 4-epimerase; COG: COG1087; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (339 aa)    
Predicted Functional Partners:
galT
Putative UTP--hexose-1-phosphate uridylyltransferase; COG: COG4468.
  
 
 0.999
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 0.995
glf
UDP-galactopyranose mutase; COG: COG0562.
    
 0.955
EEJ50837.1
Hypothetical protein; COG: COG1898.
   
 0.914
EEJ50799.1
NAD dependent epimerase/dehydratase family protein; COG: COG0451.
   
 0.914
EEJ52618.1
NAD dependent epimerase/dehydratase family protein.
   
 0.903
EEJ51462.1
Glycosyltransferase, group 2 family protein.
    
 0.898
EEJ52641.1
Hypothetical protein.
    
 0.857
EEJ52158.1
Hypothetical protein.
  
    0.769
gmhB
D,D-heptose 1,7-bisphosphate phosphatase; COG: COG0241.
    
 0.764
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.