STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ52129.1Hypothetical protein. (65 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 0.952
EEJ51691.1
Hypothetical protein.
    
 0.876
pmi
Putative mannose-6-phosphate isomerase, class I; COG: COG1482.
    
 0.875
lacZ
Beta galactosidase small chain; COG: COG3250.
 
 
 0.863
mro
Aldose 1-epimerase; COG: COG2017.
 
     0.854
EEJ52287.1
HAD hydrolase, family IA, variant 3.
   
 
  0.738
glcK
ROK family protein; COG: COG1940.
    
 0.737
EEJ51114.1
ROK family protein; COG: COG1940.
    
 0.737
agaR1
Alpha-galactosidase; COG: COG3345.
    
  0.730
agaR2
Alpha-galactosidase; COG: COG3345.
    
  0.730
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.