STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ51989.1Hypothetical protein. (362 aa)    
Predicted Functional Partners:
EEJ51991.1
Hypothetical protein.
 
     0.817
EEJ51990.1
Dihydrouridine synthase (Dus); Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
       0.783
EEJ51992.1
Hypothetical protein; COG: COG1284.
       0.773
EEJ51005.1
RNA polymerase sigma factor, FliA/WhiG family; COG: COG1191; Belongs to the sigma-70 factor family.
  
  
 0.490
EEJ51993.1
Hypothetical protein.
       0.485
EEJ51988.1
Hypothetical protein; COG: COG4868.
       0.480
EEJ51995.1
Hypothetical protein.
 
     0.437
EEJ50708.1
Putative redox-active protein (C_GCAxxG_C_C).
 
     0.433
EEJ51020.1
Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
    0.432
EEJ52377.1
Diguanylate cyclase (GGDEF) domain protein; COG: COG3706.
 
     0.423
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.