STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ51976.1ABC transporter transmembrane region; COG: COG1132. (336 aa)    
Predicted Functional Partners:
EEJ52001.1
ABC transporter, ATP-binding protein; COG: COG1132.
 
     0.975
ndvA
ABC transporter, ATP-binding protein; COG: COG1132.
 
  
  0.936
EEJ51580.1
ABC transporter, ATP-binding protein; COG: COG1132.
 
   
  0.925
EEJ51499.1
ABC transporter, ATP-binding protein; COG: COG4988.
  
  0.925
EEJ51500.1
ABC transporter, ATP-binding protein; COG: COG1132.
 
  
  0.917
EEJ52050.1
ABC transporter, ATP-binding protein; COG: COG1132.
 
  
  0.893
EEJ52024.1
ABC transporter, ATP-binding protein; COG: COG1132.
 
  
  0.870
EEJ51998.1
ABC transporter, ATP-binding protein; COG: COG1132.
 
  
  0.867
EEJ52051.1
Hypothetical protein; COG: COG1132.
  
  
  0.783
EEJ52635.1
ABC transporter, ATP-binding protein.
 
  
  0.592
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.