STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ51617.1Hypothetical protein; COG: COG0366; 3.2.1.10. (197 aa)    
Predicted Functional Partners:
malL
Alpha amylase, catalytic domain protein; COG: COG0366.
     0.994
EEJ51691.1
Hypothetical protein.
  
 
 0.930
EEJ50436.1
Alpha amylase, catalytic domain protein; COG: COG0366.
 
 
  0.918
tvaI
Alpha amylase, catalytic domain protein; COG: COG0366; Belongs to the glycosyl hydrolase 13 family.
 
 
  0.860
EEJ52410.1
Putative ATP synthase F0, A subunit; COG: COG0531.
    
 0.834
EEJ51593.1
Amino acid permease; COG: COG0531.
    
 0.834
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.817
glgP
Phosphorylase, glycogen/starch/alpha-glucan family; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.785
EEJ50329.1
Glycosyl hydrolase, family 31; COG: COG1501; Belongs to the glycosyl hydrolase 31 family.
    
 0.744
ydhR
ROK family protein; COG: COG1940.
    
 0.724
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.