STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnpEPAminopeptidase I zinc metalloprotease (M18); COG: COG1362. (443 aa)    
Predicted Functional Partners:
yqjD
Carboxyl transferase domain protein; COG: COG4799.
 
      0.650
cysS
cysteine--tRNA ligase; COG: COG0215; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
      0.615
EEJ51593.1
Amino acid permease; COG: COG0531.
 
     0.595
mgtE
Magnesium transporter; Acts as a magnesium transporter.
      
 0.556
ppk1
Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
       0.507
EEJ51595.1
Glutathione peroxidase; COG: COG0386; Belongs to the glutathione peroxidase family.
       0.460
EEJ51591.1
Radical SAM domain protein.
       0.401
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.