Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEJ50132.1 | EEJ50149.1 | HMPREF6123_2602 | HMPREF6123_2582 | comEA protein; COG: COG1555. | Putative DNA internalization competence protein ComEC/Rec2-like protein; COG: COG2333. | 0.791 |
EEJ50132.1 | EEJ51799.1 | HMPREF6123_2602 | HMPREF6123_0954 | comEA protein; COG: COG1555. | Competence/damage-inducible domain protein CinA; COG: COG1546; Belongs to the CinA family. | 0.643 |
EEJ50132.1 | xpsO | HMPREF6123_2602 | HMPREF6123_1213 | comEA protein; COG: COG1555. | Peptidase, A24 family. | 0.652 |
EEJ50149.1 | EEJ50132.1 | HMPREF6123_2582 | HMPREF6123_2602 | Putative DNA internalization competence protein ComEC/Rec2-like protein; COG: COG2333. | comEA protein; COG: COG1555. | 0.791 |
EEJ50149.1 | EEJ51799.1 | HMPREF6123_2582 | HMPREF6123_0954 | Putative DNA internalization competence protein ComEC/Rec2-like protein; COG: COG2333. | Competence/damage-inducible domain protein CinA; COG: COG1546; Belongs to the CinA family. | 0.769 |
EEJ50149.1 | dprA | HMPREF6123_2582 | HMPREF6123_0903 | Putative DNA internalization competence protein ComEC/Rec2-like protein; COG: COG2333. | DNA protecting protein DprA; COG: COG0758. | 0.926 |
EEJ50149.1 | xpsO | HMPREF6123_2582 | HMPREF6123_1213 | Putative DNA internalization competence protein ComEC/Rec2-like protein; COG: COG2333. | Peptidase, A24 family. | 0.730 |
EEJ51520.1 | EEJ51521.1 | HMPREF6123_1211 | HMPREF6123_1212 | Hypothetical protein. | Hypothetical protein. | 0.820 |
EEJ51520.1 | EEJ51523.1 | HMPREF6123_1211 | HMPREF6123_1214 | Hypothetical protein. | Bacterial type II secretion system domain protein F. | 0.955 |
EEJ51520.1 | EEJ51524.1 | HMPREF6123_1211 | HMPREF6123_1215 | Hypothetical protein. | Bacterial type II secretion system domain protein F. | 0.947 |
EEJ51520.1 | EEJ51525.1 | HMPREF6123_1211 | HMPREF6123_1216 | Hypothetical protein. | Type II/IV secretion system protein; COG: COG4962. | 0.856 |
EEJ51520.1 | xpsO | HMPREF6123_1211 | HMPREF6123_1213 | Hypothetical protein. | Peptidase, A24 family. | 0.495 |
EEJ51521.1 | EEJ51520.1 | HMPREF6123_1212 | HMPREF6123_1211 | Hypothetical protein. | Hypothetical protein. | 0.820 |
EEJ51521.1 | EEJ51523.1 | HMPREF6123_1212 | HMPREF6123_1214 | Hypothetical protein. | Bacterial type II secretion system domain protein F. | 0.662 |
EEJ51521.1 | EEJ51524.1 | HMPREF6123_1212 | HMPREF6123_1215 | Hypothetical protein. | Bacterial type II secretion system domain protein F. | 0.582 |
EEJ51521.1 | EEJ51525.1 | HMPREF6123_1212 | HMPREF6123_1216 | Hypothetical protein. | Type II/IV secretion system protein; COG: COG4962. | 0.429 |
EEJ51521.1 | xpsO | HMPREF6123_1212 | HMPREF6123_1213 | Hypothetical protein. | Peptidase, A24 family. | 0.687 |
EEJ51523.1 | EEJ51520.1 | HMPREF6123_1214 | HMPREF6123_1211 | Bacterial type II secretion system domain protein F. | Hypothetical protein. | 0.955 |
EEJ51523.1 | EEJ51521.1 | HMPREF6123_1214 | HMPREF6123_1212 | Bacterial type II secretion system domain protein F. | Hypothetical protein. | 0.662 |
EEJ51523.1 | EEJ51524.1 | HMPREF6123_1214 | HMPREF6123_1215 | Bacterial type II secretion system domain protein F. | Bacterial type II secretion system domain protein F. | 0.950 |
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