Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEJ50178.1 | EEJ51051.1 | HMPREF6123_2552 | HMPREF6123_1684 | Cell wall-binding repeat protein. | OmpA family protein; COG: COG2885. | 0.640 |
EEJ50178.1 | EEJ52249.1 | HMPREF6123_2552 | HMPREF6123_0467 | Cell wall-binding repeat protein. | Hypothetical protein. | 0.722 |
EEJ50178.1 | EEJ52346.1 | HMPREF6123_2552 | HMPREF6123_0378 | Cell wall-binding repeat protein. | Hypothetical protein. | 0.769 |
EEJ50178.1 | guaA | HMPREF6123_2552 | HMPREF6123_0500 | Cell wall-binding repeat protein. | GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP. | 0.915 |
EEJ50178.1 | guaB | HMPREF6123_2552 | HMPREF6123_2312 | Cell wall-binding repeat protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.814 |
EEJ50964.1 | EEJ51051.1 | HMPREF6123_1753 | HMPREF6123_1684 | Hypothetical protein. | OmpA family protein; COG: COG2885. | 0.561 |
EEJ50964.1 | EEJ52249.1 | HMPREF6123_1753 | HMPREF6123_0467 | Hypothetical protein. | Hypothetical protein. | 0.737 |
EEJ50964.1 | EEJ52346.1 | HMPREF6123_1753 | HMPREF6123_0378 | Hypothetical protein. | Hypothetical protein. | 0.770 |
EEJ50964.1 | guaA | HMPREF6123_1753 | HMPREF6123_0500 | Hypothetical protein. | GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP. | 0.915 |
EEJ50964.1 | guaB | HMPREF6123_1753 | HMPREF6123_2312 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.814 |
EEJ51016.1 | EEJ51051.1 | HMPREF6123_1725 | HMPREF6123_1684 | OmpA family protein. | OmpA family protein; COG: COG2885. | 0.611 |
EEJ51051.1 | EEJ50178.1 | HMPREF6123_1684 | HMPREF6123_2552 | OmpA family protein; COG: COG2885. | Cell wall-binding repeat protein. | 0.640 |
EEJ51051.1 | EEJ50964.1 | HMPREF6123_1684 | HMPREF6123_1753 | OmpA family protein; COG: COG2885. | Hypothetical protein. | 0.561 |
EEJ51051.1 | EEJ51016.1 | HMPREF6123_1684 | HMPREF6123_1725 | OmpA family protein; COG: COG2885. | OmpA family protein. | 0.611 |
EEJ51051.1 | EEJ51799.1 | HMPREF6123_1684 | HMPREF6123_0954 | OmpA family protein; COG: COG2885. | Competence/damage-inducible domain protein CinA; COG: COG1546; Belongs to the CinA family. | 0.822 |
EEJ51051.1 | EEJ52249.1 | HMPREF6123_1684 | HMPREF6123_0467 | OmpA family protein; COG: COG2885. | Hypothetical protein. | 0.665 |
EEJ51051.1 | EEJ52300.1 | HMPREF6123_1684 | HMPREF6123_0406 | OmpA family protein; COG: COG2885. | Cell wall-binding repeat protein. | 0.559 |
EEJ51051.1 | EEJ52346.1 | HMPREF6123_1684 | HMPREF6123_0378 | OmpA family protein; COG: COG2885. | Hypothetical protein. | 0.614 |
EEJ51051.1 | guaA | HMPREF6123_1684 | HMPREF6123_0500 | OmpA family protein; COG: COG2885. | GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP. | 0.822 |
EEJ51051.1 | guaB | HMPREF6123_1684 | HMPREF6123_2312 | OmpA family protein; COG: COG2885. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.813 |
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