STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ50997.1CheC-like family protein; COG: COG1776. (205 aa)    
Predicted Functional Partners:
cheD
CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
 0.999
fliN
Flagellar motor switch protein FliN; COG: COG1776.
 
 0.993
EEJ50995.1
CheW-like protein; COG: COG0835.
 
 
 0.990
EEJ51014.1
Response regulator receiver domain protein; COG: COG0784.
 
 
 0.989
EEJ50327.1
Hypothetical protein.
 
 
 0.984
fliM
Flagellar motor switch protein FliM.
 
 0.983
cheA
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0643.
 
 0.974
fliG
Flagellar motor switch protein FliG; COG: COG1536.
 
 0.953
EEJ51020.1
Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
  
 0.943
EEJ51156.1
CheW-like protein; COG: COG0835.
 
 
 0.934
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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