STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ50955.1ABC transporter, solute-binding protein; COG: COG1840. (389 aa)    
Predicted Functional Partners:
EEJ50953.1
ABC transporter, permease protein; COG: COG1178.
 
 
 0.988
EEJ52148.1
ABC transporter, permease protein.
 
 
 0.976
fbpC2
ABC transporter, ATP-binding protein; COG: COG3842; Belongs to the ABC transporter superfamily.
 
 
 0.942
EEJ52233.1
ABC transporter, permease protein.
 
  
  0.784
ugpC
ABC transporter, ATP-binding protein; COG: COG3839; Belongs to the ABC transporter superfamily.
  
 
  0.758
EEJ52232.1
ABC transporter, solute-binding protein; COG: COG4134.
    
  0.716
EEJ52235.1
ABC transporter, permease protein.
 
  
  0.702
EEJ52149.1
ABC transporter, ATP-binding protein; COG: COG3842.
 
 
 0.679
EEJ50737.1
HAMP domain protein; COG: COG2972.
   
   0.666
EEJ50478.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG2972.
   
   0.666
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.