Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEJ50889.1 | aroC | HMPREF6123_1833 | HMPREF6123_1187 | Putative GMP synthase (glutamine-hydrolyzing) domain protein; COG: COG0512. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.963 |
| EEJ50889.1 | guaA | HMPREF6123_1833 | HMPREF6123_0500 | Putative GMP synthase (glutamine-hydrolyzing) domain protein; COG: COG0512. | GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP. | 0.591 |
| EEJ50889.1 | ilvE | HMPREF6123_1833 | HMPREF6123_2577 | Putative GMP synthase (glutamine-hydrolyzing) domain protein; COG: COG0512. | Branched-chain-amino-acid transaminase; COG: COG0115. | 0.893 |
| EEJ50889.1 | pheA | HMPREF6123_1833 | HMPREF6123_0375 | Putative GMP synthase (glutamine-hydrolyzing) domain protein; COG: COG0512. | Prephenate dehydratase; COG: COG0077. | 0.977 |
| EEJ50889.1 | trpA | HMPREF6123_1833 | HMPREF6123_1828 | Putative GMP synthase (glutamine-hydrolyzing) domain protein; COG: COG0512. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.990 |
| EEJ50889.1 | trpB-2 | HMPREF6123_1833 | HMPREF6123_1829 | Putative GMP synthase (glutamine-hydrolyzing) domain protein; COG: COG0512. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.910 |
| EEJ50889.1 | trpC | HMPREF6123_1833 | HMPREF6123_1832 | Putative GMP synthase (glutamine-hydrolyzing) domain protein; COG: COG0512. | Indole-3-glycerol phosphate synthase; COG: COG0134; Belongs to the TrpC family. | 0.999 |
| EEJ50889.1 | trpD | HMPREF6123_1833 | HMPREF6123_1831 | Putative GMP synthase (glutamine-hydrolyzing) domain protein; COG: COG0512. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.999 |
| EEJ50889.1 | trpE | HMPREF6123_1833 | HMPREF6123_1834 | Putative GMP synthase (glutamine-hydrolyzing) domain protein; COG: COG0512. | Chorismate binding enzyme; COG: COG0147. | 0.999 |
| EEJ50889.1 | trpF | HMPREF6123_1833 | HMPREF6123_1830 | Putative GMP synthase (glutamine-hydrolyzing) domain protein; COG: COG0512. | N-(5'phosphoribosyl)anthranilate isomerase; COG: COG0135; Belongs to the TrpF family. | 0.990 |
| aroC | EEJ50889.1 | HMPREF6123_1187 | HMPREF6123_1833 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Putative GMP synthase (glutamine-hydrolyzing) domain protein; COG: COG0512. | 0.963 |
| aroC | guaA | HMPREF6123_1187 | HMPREF6123_0500 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP. | 0.786 |
| aroC | ilvE | HMPREF6123_1187 | HMPREF6123_2577 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Branched-chain-amino-acid transaminase; COG: COG0115. | 0.560 |
| aroC | pheA | HMPREF6123_1187 | HMPREF6123_0375 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Prephenate dehydratase; COG: COG0077. | 0.994 |
| aroC | trpA | HMPREF6123_1187 | HMPREF6123_1828 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.729 |
| aroC | trpB-2 | HMPREF6123_1187 | HMPREF6123_1829 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.443 |
| aroC | trpC | HMPREF6123_1187 | HMPREF6123_1832 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Indole-3-glycerol phosphate synthase; COG: COG0134; Belongs to the TrpC family. | 0.570 |
| aroC | trpD | HMPREF6123_1187 | HMPREF6123_1831 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.937 |
| aroC | trpE | HMPREF6123_1187 | HMPREF6123_1834 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Chorismate binding enzyme; COG: COG0147. | 0.947 |
| aroC | trpF | HMPREF6123_1187 | HMPREF6123_1830 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | N-(5'phosphoribosyl)anthranilate isomerase; COG: COG0135; Belongs to the TrpF family. | 0.575 |
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