STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ50793.1ABC transporter, permease protein; COG: COG0765. (220 aa)    
Predicted Functional Partners:
EEJ50792.1
ABC transporter, substrate-binding protein, family 3; COG: COG0834.
 0.999
EEJ50791.1
ABC transporter, ATP-binding protein; COG: COG1126.
 0.997
EEJ51731.1
ABC transporter, substrate-binding protein, family 3; COG: COG0834; Belongs to the bacterial solute-binding protein 3 family.
 0.988
EEJ51729.1
ABC transporter, ATP-binding protein; COG: COG1126.
 0.972
EEJ51358.1
ABC transporter, ATP-binding protein; COG: COG1126.
 0.971
EEJ50974.1
ABC transporter, ATP-binding protein; COG: COG1126.
 0.971
EEJ51360.1
ABC transporter, substrate-binding protein, family 3; COG: COG0834; Belongs to the bacterial solute-binding protein 3 family.
 0.892
EEJ51730.1
ABC transporter, permease protein; COG: COG0765.
 
 
0.722
artP
Arginine ABC transporter, periplasmic arginine-binding protein ArtP.
 0.709
EEJ51359.1
ABC transporter, permease protein; COG: COG0765.
 
  
 
0.671
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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