STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gnpA1,3-beta-galactosyl-N-acetylhexosamine phosphorylase. (749 aa)    
Predicted Functional Partners:
EEJ50773.1
Phosphotransferase enzyme family.
 
     0.703
EEJ50794.1
Transcriptional regulator, AraC family.
 
     0.654
EEJ51663.1
Hypothetical protein.
  
     0.486
EEJ50798.1
Hypothetical protein.
 
     0.469
EEJ50771.1
Hypothetical protein; COG: COG1175.
 
     0.415
EEJ50093.1
Acetyltransferase, GNAT family.
  
     0.408
EEJ50797.1
ABC transporter, solute-binding protein.
 
     0.405
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.