STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ50746.1Transcriptional regulator, LacI family; COG: COG1609. (340 aa)    
Predicted Functional Partners:
EEJ51691.1
Hypothetical protein.
    
 0.843
EEJ50745.1
Glycosyl hydrolase family 32; COG: COG1621; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.835
EEJ51965.1
Phosphocarrier, HPr family; COG: COG1925.
   
 
 0.681
EEJ51232.1
Phosphocarrier, HPr family; COG: COG1925.
   
 
 0.681
rbsK
Putative ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 0.599
pyk
Pyruvate kinase; COG: COG0469; Belongs to the pyruvate kinase family.
    
 
 0.568
EEJ50747.1
ABC transporter, permease protein; COG: COG0395.
       0.540
msmF
Transmembrane permease MsmF; COG: COG1175.
       0.536
EEJ50402.1
Sugar-binding domain protein; COG: COG1879.
 
 
  0.527
EEJ50749.1
ABC transporter, solute-binding protein.
 
     0.510
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.