STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ50747.1ABC transporter, permease protein; COG: COG0395. (281 aa)    
Predicted Functional Partners:
msmF
Transmembrane permease MsmF; COG: COG1175.
  0.974
ugpC
ABC transporter, ATP-binding protein; COG: COG3839; Belongs to the ABC transporter superfamily.
 0.930
EEJ50749.1
ABC transporter, solute-binding protein.
 
  0.928
EEJ51769.1
ABC transporter, permease protein; COG: COG1175.
 
  0.900
EEJ50165.1
ABC transporter, permease protein; COG: COG1175.
 
  0.898
EEJ50722.1
ABC transporter, permease protein; COG: COG1175.
 
  0.894
EEJ51698.1
ABC transporter, permease protein; COG: COG1175.
 
  0.892
EEJ50944.1
ABC transporter, permease protein; COG: COG1175.
 
  0.890
EEJ52466.1
ABC transporter, permease protein; COG: COG1175.
  
  0.884
EEJ51118.1
ABC transporter, permease protein; COG: COG1175.
 
  0.883
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.