STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ50750.1Transcriptional regulator, DeoR family; COG: COG1349. (271 aa)    
Predicted Functional Partners:
pfkB
1-phosphofructokinase; COG: COG1105; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.895
EEJ50751.1
Transporter, gluconate:H+ symporter family; COG: COG2610.
 
     0.642
fabG
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.591
fabG1
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028.
  
    0.591
rpiB
Ribose-5-phosphate isomerase B; COG: COG0698.
  
 
 0.556
EEJ50753.1
Hypothetical protein; COG: COG3395.
 
    0.480
pdxA
4-hydroxythreonine-4-phosphate dehydrogenase; COG: COG1995; Belongs to the PdxA family.
       0.451
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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