STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ50759.1Branched-chain amino acid ABC transporter, permease protein; COG: COG4603; Belongs to the binding-protein-dependent transport system permease family. (357 aa)    
Predicted Functional Partners:
EEJ50760.1
ABC transporter, ATP-binding protein; COG: COG3845.
 
  0.982
EEJ50758.1
Branched-chain amino acid ABC transporter, permease protein; COG: COG1079; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.954
EEJ50740.1
Hypothetical protein; COG: COG3845.
 
  0.954
EEJ51351.1
ABC transporter, ATP-binding protein; COG: COG3845.
 
  0.927
EEJ51506.1
ABC transporter, ATP-binding protein; COG: COG3845.
 
  0.925
rbsA2
ABC transporter, ATP-binding protein; COG: COG3845.
 
  0.922
EEJ50741.1
Basic membrane protein; COG: COG1744.
 
 
  0.908
EEJ51489.1
Basic membrane protein; COG: COG1744.
 
 
  0.866
EEJ51354.1
Basic membrane protein; COG: COG1744.
 
 
  0.865
EEJ50735.1
Basic membrane protein; COG: COG1744.
 
 
  0.848
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.