STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ50727.1Glycosyl hydrolase family 2, sugar binding domain protein; Belongs to the glycosyl hydrolase 2 family. (608 aa)    
Predicted Functional Partners:
EEJ50730.1
ABC transporter, solute-binding protein.
 
     0.881
pmi
Putative mannose-6-phosphate isomerase, class I; COG: COG1482.
    
 0.868
lacZ
Beta galactosidase small chain; COG: COG3250.
  
  
  0.802
mro
Aldose 1-epimerase; COG: COG2017.
 
 
 0.745
EEJ52383.1
YhcH/YjgK/YiaL family protein; COG: COG2731.
   
 0.732
EEJ50728.1
ABC transporter, permease protein; COG: COG0395.
       0.732
EEJ50729.1
ABC transporter, permease protein; COG: COG1175.
  
    0.732
fabG
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.707
fabG1
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028.
  
 
 0.707
pfkB
1-phosphofructokinase; COG: COG1105; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
   
    0.671
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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