STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ50477.1Hypothetical protein. (323 aa)    
Predicted Functional Partners:
EEJ50478.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG2972.
 
 
   0.966
EEJ50479.1
Response regulator receiver domain protein; COG: COG4753.
 
  
  0.936
EEJ50476.1
Hypothetical protein; COG: COG1879.
 
     0.896
EEJ50995.1
CheW-like protein; COG: COG0835.
   
 0.842
EEJ50327.1
Hypothetical protein.
   
 0.842
EEJ52455.1
ABC transporter, ATP-binding protein; COG: COG1129.
 
  0.704
EEJ52456.1
Sugar-binding domain protein; COG: COG1879.
 
     0.704
EEJ50480.1
Hypothetical protein.
       0.671
mglA
ABC transporter, ATP-binding protein; COG: COG1129.
 
  0.669
EEJ52470.1
Branched-chain amino acid ABC transporter, permease protein; COG: COG4211; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.665
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.