STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ50481.1Hypothetical protein. (201 aa)    
Predicted Functional Partners:
EEJ51583.1
Cobalt transport protein.
 
 
 
 0.866
EEJ52622.1
Cobalt transport protein; COG: COG0619.
   
 
 0.841
EEJ52026.1
Cobalt transport protein.
   
 
 0.841
coaX
Putative pantothenate kinase, type III; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.822
EEJ50383.1
Hypothetical protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.
      
 0.555
birA
biotin--[acetyl-CoA-carboxylase] ligase; COG: COG0340.
     
 0.553
EEJ50698.1
Sigma-70 region 2; Belongs to the sigma-70 factor family.
  
     0.514
EEJ52180.1
Hypothetical protein.
  
     0.511
EEJ52190.1
Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.477
EEJ51119.1
ABC transporter, solute-binding protein.
  
     0.467
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.