STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argGArgininosuccinate synthase; COG: COG0137; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (414 aa)    
Predicted Functional Partners:
argH
Argininosuccinate lyase; COG: COG0165.
 
 0.997
EEJ50098.1
Hypothetical protein; COG: COG0165.
 
 
 0.992
EEJ52350.1
Hypothetical protein.
  
 
 0.982
ygeW
Putative carbamoyltransferase YgeW; COG: COG0078; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.960
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
 
 0.960
yclM
Aspartate kinase; COG: COG0527; Belongs to the aspartokinase family.
 
 
 0.932
argE
Peptidase, ArgE/DapE family; COG: COG0624.
  
 0.921
EEJ51574.1
Aminotransferase, class I/II; COG: COG0436.
  
 0.907
ansA
L-asparaginase, type I; COG: COG0252.
   
 
 0.894
pyrB
Aspartate carbamoyltransferase; COG: COG0540; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
 
 0.892
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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