STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agaR2Alpha-galactosidase; COG: COG3345. (755 aa)    
Predicted Functional Partners:
lacZ
Beta galactosidase small chain; COG: COG3250.
 
  
 0.926
EEJ50329.1
Glycosyl hydrolase, family 31; COG: COG1501; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.846
tvaI
Alpha amylase, catalytic domain protein; COG: COG0366; Belongs to the glycosyl hydrolase 13 family.
   
 
 0.817
EEJ50943.1
Family 4 glycosyl hydrolase; COG: COG1486.
    
  0.807
EEJ50745.1
Glycosyl hydrolase family 32; COG: COG1621; Belongs to the glycosyl hydrolase 32 family.
 
  
 0.799
sacA
Glycosyl hydrolase family 32; COG: COG1621; Belongs to the glycosyl hydrolase 32 family.
 
  
 0.795
EEJ50536.1
Glycosyl hydrolase family 32; COG: COG1621; Belongs to the glycosyl hydrolase 32 family.
 
  
 0.779
EEJ51700.1
Glycosyl hydrolase family 32.
    
 0.734
mro
Aldose 1-epimerase; COG: COG2017.
    
  0.730
EEJ52129.1
Hypothetical protein.
    
  0.730
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.