STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ50238.1Putative cell division protein FtsL. (185 aa)    
Predicted Functional Partners:
spoVD
Penicillin-binding protein, transpeptidase domain protein; COG: COG0768.
 
     0.896
EEJ50233.1
Hypothetical protein.
 
     0.866
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
       0.789
EEJ52670.1
Hypothetical protein.
  
     0.775
EEJ52550.1
Hypothetical protein.
  
     0.775
EEJ52067.1
Hypothetical protein.
  
     0.775
EEJ51834.1
Hypothetical protein.
  
     0.775
EEJ51325.1
Hypothetical protein.
  
     0.775
EEJ51228.1
Hypothetical protein.
  
     0.775
EEJ51196.1
Putative CRISPR-associated protein Csc1.
  
     0.775
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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