STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grdE-2Glycine reductase, subunit ABC. (428 aa)    
Predicted Functional Partners:
EEJ50179.1
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family.
 
  
 0.966
EEJ50181.1
Hypothetical protein.
 
   
 0.912
EEJ50197.1
Putative glycine/sarcosine/betaine reductase complex component A.
 
   
 0.888
EEJ50201.1
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase domain protein.
 
     0.886
grdF
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family.
 
  
 0.857
EEJ50198.1
Putative glycine/sarcosine/betaine reductase complex component A.
 
     0.847
grdC
Glycine reductase complex component C, beta subunit.
 
   
 0.838
plsX-2
Fatty acid/phospholipid synthesis protein PlsX.
 
   
 0.837
EEJ51149.1
Hypothetical protein.
 
   
 0.797
EEJ51146.1
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase domain protein.
 
     0.788
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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