STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ50149.1Putative DNA internalization competence protein ComEC/Rec2-like protein; COG: COG2333. (868 aa)    
Predicted Functional Partners:
dprA
DNA protecting protein DprA; COG: COG0758.
 
  
 0.926
EEJ51316.1
comF family protein; COG: COG1040.
 
  
 0.893
EEJ50132.1
comEA protein; COG: COG1555.
  
  
 0.791
EEJ51799.1
Competence/damage-inducible domain protein CinA; COG: COG1546; Belongs to the CinA family.
     
 0.769
pheT
phenylalanine--tRNA ligase, beta subunit; COG: COG0072; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
   
 0.739
EEJ52377.1
Diguanylate cyclase (GGDEF) domain protein; COG: COG3706.
  
    0.732
EEJ52551.1
Hypothetical protein.
  
  
 0.730
xpsO
Peptidase, A24 family.
  
  
 0.730
EEJ52260.1
FtsK/SpoIIIE family protein; COG: COG1674.
 
  
 0.716
holA
DNA polymerase III, delta subunit.
 
   
 0.711
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.