STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metAHomoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. (328 aa)    
Predicted Functional Partners:
metB
Cys/Met metabolism PLP-dependent enzyme; COG: COG0626.
  
 
 0.963
yclM
Aspartate kinase; COG: COG0527; Belongs to the aspartokinase family.
 
 
 0.946
EEJ51634.1
Homoserine dehydrogenase; COG: COG0460.
  
 
 0.943
cysD2
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; COG: COG2873.
 
 
 0.943
cysD1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; COG: COG2873.
  
 
 0.932
ilvA
Threonine ammonia-lyase; COG: COG1171.
   
 
 0.895
sdaAA
L-serine dehydratase, iron-sulfur-dependent, alpha subunit; COG: COG1760; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.892
sdaAB
L-serine dehydratase, iron-sulfur-dependent, beta subunit; COG: COG1760; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.892
metF
Methylenetetrahydrofolate reductase (NAD(P)H); COG: COG0685; Belongs to the methylenetetrahydrofolate reductase family.
  
  
 0.880
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
    
  0.822
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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