STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltAGlutamate synthase (NADPH), homotetrameric; COG: COG0493. (462 aa)    
Predicted Functional Partners:
EEJ50117.1
ferredoxin--NADP+ reductase, subunit alpha; COG: COG0543.
 0.999
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 0.980
EEJ52003.1
Hydrogenase, Fe-only; COG: COG4624.
   
 0.978
nifJ
Pyruvate synthase; COG: COG0674.
   
 0.968
pyrDB
Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate.
 
 0.956
gdh
Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; COG: COG0334; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.943
pyrK
Oxidoreductase NAD-binding domain protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
 0.918
EEJ52503.1
Pyridine nucleotide-disulfide oxidoreductase; COG: COG0493.
  
  
 
0.902
EEJ52350.1
Hypothetical protein.
  
 
 0.895
glnA
Glutamate--ammonia ligase, catalytic domain protein; COG: COG3968; Belongs to the glutamine synthetase family.
    
 0.895
Your Current Organism:
Oribacterium sinus
NCBI taxonomy Id: 585501
Other names: O. sinus F0268, Oribacterium sinus F0268, Oribacterium sinus str. F0268, Oribacterium sinus strain F0268
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