STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EER74554.1ABC transporter, ATP-binding protein; COG: COG1136; Pfam: PF00005,PF02687; InterPro: IPR003593. (662 aa)    
Predicted Functional Partners:
EER74390.1
Efflux ABC transporter, permease protein; COG: COG0577; Pfam: PF02687.
  
 
 0.997
EER74388.1
Hypothetical protein; COG: COG0577.
  
 
 0.860
EER74389.1
Efflux ABC transporter, permease protein; COG: COG0577; Pfam: PF02687; InterPro: IPR003838.
  
 
 0.667
EER75470.1
Efflux ABC transporter, permease protein; COG: COG0577; Pfam: PF02687; InterPro: IPR003838.
 
 
 0.573
EER75024.1
Hypothetical protein.
  
     0.570
EER75336.1
ABC transporter, ATP-binding protein; COG: COG1121; Pfam: PF00005; InterPro: IPR003593.
 
  
 0.540
EER75469.1
ABC transporter, ATP-binding protein; COG: COG1136; Pfam: PF00005; InterPro: IPR003593.
 
 
0.537
EER74363.1
ABC transporter, ATP-binding protein; COG: COG1136; Pfam: PF00005; InterPro: IPR003593.
 
 
0.527
pepN
Peptidase family M1; COG: COG0308; Pfam: PF01433; InterPro: IPR001930.
 
     0.525
EER74387.1
ABC transporter, ATP-binding protein; COG: COG1136; Pfam: PF00005; InterPro: IPR003593.
 
 
0.524
Your Current Organism:
Weissella paramesenteroides
NCBI taxonomy Id: 585506
Other names: W. paramesenteroides ATCC 33313, Weissella paramesenteroides ATCC 33313, Weissella paramesenteroides str. ATCC 33313, Weissella paramesenteroides strain ATCC 33313
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.